PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun009020
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Dof
Protein Properties Length: 245aa    MW: 26615.9 Da    PI: 8.6768
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45887011PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof129.59.5e-411677263
     zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
               +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  Vun009020 16 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 77
               7899******************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027012.5E-341874IPR003851Zinc finger, Dof-type
ProDomPD0074781.0E-262074IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.6462074IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102258IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
LACSKAQQER KPRPQPEQAL KCPRCDSTNT KFCYYNNYSL SQPRYFCKSC RRYWTKGGTL  60
RNVPVGGGCR KNKRSSSSSS SSSSKRIQDQ GFTPNPNNPL TGLPSLSYDS SDLTLALARL  120
QKQSCGQLGY DEHDFSILGN PTSTPCDILG NPGMHHSSTN PGFLDSLRSG FLGTQSNVQN  180
LYYGYGNGDM GEVDNGNACA GAGGGVSGEM MLPYDQEMSV GNNTSSHSDH HXNKNFAMQG  240
SKVRX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027911338.11e-163dof zinc finger protein DOF2.1
TrEMBLA0A4D6LHY91e-162A0A4D6LHY9_VIGUN; Uncharacterized protein
STRINGXP_007132171.11e-139(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.18e-38TARGET OF MONOPTEROS 6