PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun009060
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 243aa    MW: 28059.9 Da    PI: 9.999
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-17912PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.20.00071431118
               CHHHHHHHHHHHHHHHHH CS
        HLH  1 rrrahnerErrRRdriNs 18
               +r+++ e+ErrR++ri +
  Vun009060 14 KRETKREIERRRMSRIST 31
               79**************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF043871.9E-4777234IPR007482Protein-tyrosine phosphatase-like, PTPLA
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
XFIIPISGEL GKEKRETKRE IERRRMSRIS TFYLLAYNSF QTVGWTLSLI KILYNLLATA  60
SINGTYASAG NLICFLQCAA FLEVIHGAIG IVPSGVLLPL MQWGGRTHFV LAIVRKLDEL  120
QELPSVFITF LAWSMGEVIR YSHYAFSCSG NCPSWMTYLR YTAFIVLYPL GVGPGEIWTM  180
YQALPFIKKK NLYADSFSGL PFSYYDFLKV VLVAYPFLWF KLYLHMFKQR RAKLYKRHDK  240
KTT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027909649.11e-161very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2
RefseqXP_027909650.11e-161very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2
RefseqXP_027909651.11e-161very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2
TrEMBLA0A4D6LJ191e-158A0A4D6LJ19_VIGUN; 3-hydroxy acyl-CoA dehydratase
STRINGXP_007132106.11e-155(Phaseolus vulgaris)