PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun009061
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 243aa    MW: 26861.6 Da    PI: 5.1668
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-22377PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.92.2e-087312348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W++Ia++++  Rt++++k++w+++l
        Vun009061  7 RWAAIASYLP-QRTDNDIKNYWNTHL 31
                     4*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.311135IPR017930Myb domain
SuperFamilySSF466898.97E-8637IPR009057Homeodomain-like
PfamPF002499.4E-7731IPR001005SANT/Myb domain
CDDcd001673.80E-6731No hitNo description
Gene3DG3DSA:1.10.10.602.4E-12737IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MTLLCYRWAA IASYLPQRTD NDIKNYWNTH LRKKLKKLQT GCEGSMGDAF SGSRQIPRGQ  60
WERRLQTDIQ MAKRALSEAL SPEKPFVLSG SNSNPSDSSS SFSSTKPSQS LCYASSAENI  120
ARMLKGLDEK PTKVPQEXNS SVTQNSFNNL VAAGADTASS GAKGPNSVEL SENFESLFEF  180
HQSLESSNSD QLSQSFSPEA TVLQEERKPD IGAEIMPFSL LEKWLLDEAS CQEKLGYGDA  240
KFF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027927257.11e-143myb-related protein 306-like
TrEMBLA0A4D6NIY41e-142A0A4D6NIY4_VIGUN; Myb proto-oncogene protein
STRINGXP_007139579.11e-116(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.13e-31myb domain protein 94