PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun009145
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 240aa    MW: 27244.9 Da    PI: 4.8374
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-10722PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.3e-125396755
               HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                 Er+RR+++N++++ Lr ++P+ +      K++ a+i + A+eYI++L+
  Vun009145 53 VSERNRRKKLNERLFALRAVVPNiS------KMDEASIIKDAIEYIQHLH 96
               57*********************66......*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.6374695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.06E-1746109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.58E-1249100No hitNo description
SMARTSM003538.0E-1452101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.3E-1652109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.1E-105395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MDNMGGDYNR FWDTFFQNQD LDSWAMDEAA MSGYYDSSSP DGGASSVTSK NIVSERNRRK  60
KLNERLFALR AVVPNISKMD EASIIKDAIE YIQHLHEQEK RIEAEILDLE SGKLKNPTYE  120
FEHDLPILLR SKKKRTEQLF DSATSRNSPI QLIELRVAYM GDKTFVVSLT CSKRIDTMVK  180
LCEVFESLNL KVITANITSF SGTLLKTVFI EADEEEKDVL QIKIETAISA LNGPQSPMSI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A4e-1351111969Transcription factor MYC2
5gnj_B4e-1351111969Transcription factor MYC2
5gnj_E4e-1351111969Transcription factor MYC2
5gnj_F4e-1351111969Transcription factor MYC2
5gnj_G4e-1351111969Transcription factor MYC2
5gnj_I4e-1351111969Transcription factor MYC2
5gnj_M4e-1351111969Transcription factor MYC2
5gnj_N4e-1351111969Transcription factor MYC2
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027921103.11e-177transcription factor bHLH35-like
SwissprotQ2HIV92e-89BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A1S3UNY91e-170A0A1S3UNY9_VIGRR; transcription factor bHLH35
TrEMBLA0A4D6KS241e-163A0A4D6KS24_VIGUN; Proline-rich protein PRCC
STRINGXP_007154705.11e-135(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.13e-80bHLH family protein