PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun009198
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 239aa    MW: 25826.9 Da    PI: 7.0778
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45787457PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.82.9e-11201236444
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiL 44 
                 hn  ErrRRdriN+++  L+el+P++      K +Ka++L
  Vun009198 201 VHNLSERRRRDRINEKMRALQELIPNC-----NKADKASML 236
                6*************************8.....578888777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-12195237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.856197239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.25E-10200238No hitNo description
PfamPF000101.1E-8201236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-13201238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MEKQGPVACS SSSTMMNFSL FAKPAAIVKA NLENIGLASR SRSVGIKIKG AAATVAANPS  60
ESTKVELFGE CPKKTVTQSH HHVTEPKHLE QDGGVSTKCD PSCKDVCRVD DTSNVVVGES  120
VNKGKEAVEK NAEPAVVSSS VCSGNGAERG LKDPNQILKT KSTDTDDFES QSEDVEEESV  180
GVEKEVPAPR IGAKRHRSAE VHNLSERRRR DRINEKMRAL QELIPNCNKA DKASMLDER
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205210ERRRRD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027909342.11e-168transcription factor PIF3-like
TrEMBLA0A4D6MD831e-165A0A4D6MD83_VIGUN; Phytochrome-interacting factor 3
STRINGGLYMA19G41261.11e-115(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.23e-26phytochrome interacting factor 3