PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun009332
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 234aa    MW: 26242.7 Da    PI: 5.7121
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45804974PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.45.2e-13118169155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  Vun009332 118 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YIQRGDQASIIGGAINFVKELE 169
                79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.95E-13116173No hitNo description
Gene3DG3DSA:4.10.280.101.8E-13116173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-16117180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.434117168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-10118169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-9123174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MALEAVVFPQ SQDPFGGYGS VKDFYNCTFL AATSPNWGDY EHININIDKE EEQGSISTFL  60
DNNNNNPYGG DWTSSSSSIL PHFNELQETT DPSNTTLTTR PKRRRAKSRK NKEEIENQRM  120
THIAVERNRR KQMNEYLSVL RSLMPDSYIQ RGDQASIIGG AINFVKELEQ RLHFLGAQKE  180
GEAKSDAGGG GSEXFCDRSE DVGEVKSGIA DIEVTMVESH ANLKIRSKKR PNNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118129RMTHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027934017.11e-160transcription factor bHLH94-like
TrEMBLA0A4D6N2701e-159A0A4D6N270_VIGUN; Transcription factor MYC2
STRINGXP_007144754.11e-143(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.15e-49bHLH family protein