PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun009396
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Trihelix
Protein Properties Length: 232aa    MW: 27144.7 Da    PI: 10.3358
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45916549PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.82.8e-087454686
   trihelix 46 spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
               s+k+Ckek+en+ k+ k++ke+++++   + +t+++fdql+
  Vun009396  7 SAKKCKEKFENVYKYNKRTKENKSGK--SHGKTYKFFDQLQ 45
               89*******************99996..55667******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
XFFFFLSAKK CKEKFENVYK YNKRTKENKS GKSHGKTYKF FDQLQALENH QFTISYPSKP  60
QPTLATTNTL TLPARQSDHG NNNVISYVTP FPSTNPTHIS PSPQPNTDTT TVSTTNRRDT  120
SPPQTTATNT NNTNNDNVTY SLPNMNTPFS TTTTTTTSTS SSTASDEDLE ERYRRKRKWK  180
DYFRRLTRKV LLKQEEMQMK FLEAMDKRER ERVAQQDNWR MQEMARMNRE HX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014516655.11e-112trihelix transcription factor GT-2-like isoform X1
RefseqXP_014516663.11e-113trihelix transcription factor GT-2-like isoform X2
TrEMBLA0A4D6M0G91e-160A0A4D6M0G9_VIGUN; Uncharacterized protein
STRINGXP_007152025.11e-101(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-17Trihelix family protein