PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun009646
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Dof
Protein Properties Length: 223aa    MW: 24342.6 Da    PI: 10.1145
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45849001PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.57e-392686262
     zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
               +++ +kcprCds ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+++
  Vun009646 26 PQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAK 86
               68899***************************************************99976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027013.0E-332884IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.8353084IPR003851Zinc finger, Dof-type
ProDomPD0074781.0E-243184IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103268IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
XMNKPPQDSR MKEMQQGDAQ PQVQAPQQPQ KCPRCDSLNT KFCYYNNYSL SQPRYFCKTC  60
RRYWTQGGTL RNVPVGGGCR KGKRAKSSNP SSSSENSSSR SLPQQQQSQD VVVQTQPPPL  120
TTVPRAKDPS SVLASPFYQS GGYLSSLAAI HSLNPSSHPF DQSLNSDALR SSNLGLLSAF  180
NVQRPTGSIG TIRPPQLYQM GSGQRGVVSL YDQGLVNPSS SSX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027930664.11e-156dof zinc finger protein DOF3.4-like
TrEMBLA0A4D6KK491e-155A0A4D6KK49_VIGUN; Uncharacterized protein
STRINGGLYMA13G31110.11e-113(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.14e-33TARGET OF MONOPTEROS 6