PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun010112
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 204aa    MW: 23457.2 Da    PI: 9.9504
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45797055PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.44.6e-26121180259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                dDg++WrKYGqKe+ +++fpr+YYrCt++  gC+++k+v+r +edp + +++Y geH ++
  Vun010112 121 DDGHQWRKYGQKEILNAKFPRNYYRCTHRdqGCQATKQVQRVQEDPILYKTIYYGEHSCK 180
                8***************************9999*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.5E-27106181IPR003657WRKY domain
PROSITE profilePS5081120.449115178IPR003657WRKY domain
SuperFamilySSF1182903.27E-25118180IPR003657WRKY domain
SMARTSM007747.4E-36120181IPR003657WRKY domain
PfamPF031066.4E-26121180IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MDNLSGSTSR KKAIEELLRG RDSATQLRSV INGSGEDLSS AKKLVKEVLM SFTNSLLLLN  60
TSNTTSEFHD DVSNVQLWDS PKLEDLKRAI ARTPQFKARR GCYKRRRTEQ TREKESKAPI  120
DDGHQWRKYG QKEILNAKFP RNYYRCTHRD QGCQATKQVQ RVQEDPILYK TIYYGEHSCK  180
SLTNPEIILD PMSPSSSSKF LSFX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-20120180869OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027926250.11e-135WRKY DNA-binding transcription factor 70-like
TrEMBLA0A0L9TCQ91e-113A0A0L9TCQ9_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RTJ61e-113A0A0S3RTJ6_PHAAN; Uncharacterized protein
STRINGXP_007140073.13e-99(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-29WRKY DNA-binding protein 70