PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun010311
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 196aa    MW: 22754.3 Da    PI: 6.5068
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-6274PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.63.6e-1585134554
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                ++ rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L ++l++ ++
  Vun010311  85 RKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSE 134
                578*****************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.9E-1381145IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.72683146IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-1385135No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-1285157No hitNo description
PfamPF001706.3E-1385135IPR004827Basic-leucine zipper domain
CDDcd147024.55E-1986137No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MQGREITGLN YLLPSDPYPY PSHCSMTQNT IPTFQLHKLS NQFYGFQNPQ QMVAEFSPPQ  60
SSCISSTTST SDEADEQHQS LINERKHRRM ISNRESARRS RMRKQKHLDE LWSQVVWLRN  120
ENHQLMDKLN HVSESHDRVS QENVQLREEA SELRQMICDM QLHSPYHPPP LSPIDDDVSP  180
YVKSDSSITS SFNLLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197104RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027927007.11e-145basic leucine zipper 43-like
SwissprotQ9FMC21e-44BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A4D6NHC91e-143A0A4D6NHC9_VIGUN; Extracellular signal-regulated kinase 1/2
STRINGGLYMA18G51250.11e-118(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.15e-46basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]