PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun010347

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

ERF

Protein Properties

Length: 195aa MW: 22088.6 Da PI: 6.2798

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S50216747	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	66.5	5.1e-21	59	109	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+W+AeIrdp+ r +r++lg+f tae+Aa+a+++a+ +++g Vun010347 59 KKYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFNTAEDAARAYDKAAIEFRG 109 59******.******82....48**********************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00847	1.8E-14	60	109	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	2.94E-23	60	118	IPR016177	DNA-binding domain
Gene3D	G3DSA:3.30.730.10	1.2E-33	60	118	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	25.396	60	117	IPR001471	AP2/ERF domain
SMART	SM00380	1.7E-39	60	123	IPR001471	AP2/ERF domain
CDD	cd00018	7.59E-34	61	117	No hit	No description
PRINTS	PR00367	4.1E-12	61	72	IPR001471	AP2/ERF domain
PRINTS	PR00367	4.1E-12	83	99	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence Send to blast
XPHTTGHLLF LFLPNASQPL AGNTFAPPTM DTCRECNIAG CLGCNFFPEE KKKQKRAKKK 60 YRGVRQRPWG KWAAEIRDPR RAARVWLGTF NTAEDAARAY DKAAIEFRGP RAKLNFPLVD 120 ESLSMQQSEP QRVAAEEQIK NENLNQGMEM ETLEFGNKDT EFWDRIGEAD FHQLMMMMDF 180 TGDSSDSATG DTLSS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2gcc_A	2e-24	59	118	4	64	ATERF1
3gcc_A	2e-24	59	118	4	64	ATERF1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027917702.1	1e-136	ethylene-responsive transcription factor ERF109-like
TrEMBL	A0A4D6L3Y2	1e-135	A0A4D6L3Y2_VIGUN; EREBP-like factor
STRING	XP_007156515.1	1e-103	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34410.1	3e-27	redox responsive transcription factor 1