PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun010426
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 192aa    MW: 21149.4 Da    PI: 6.948
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45901746PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87e-12127171554
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                h ++Er+RR+++ ++f  L   +P +      K +Ka++L+ A++Y+k+L
  Vun010426 127 HIMAERKRRQELTERFIALSATIPGL-----NKTDKASVLRAAIDYVKQL 171
                999**********************8.....6*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.11E-17113183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.301122171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.46E-11127176No hitNo description
Gene3DG3DSA:4.10.280.105.0E-17127184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-9127171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-14128177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MDCQNEFFPI NDDCDDDFFT DLIPPTPFSS ESESDHSFRA SNTVHNTSFL PGAAVNAAVN  60
AVVASKRSSP RTYILSFDSS TVVPATPEPS VPSSPLPAKR ALHTLSPTAR PNQGSKRTRT  120
SSQTIDHIMA ERKRRQELTE RFIALSATIP GLNKTDKASV LRAAIDYVKQ LXEKVEELEK  180
QNRKSVAETV IL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130135ERKRRQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017407422.11e-113PREDICTED: transcription factor bHLH18-like
TrEMBLA0A0L9T9H61e-112A0A0L9T9H6_PHAAN; Uncharacterized protein
STRINGXP_007135787.12e-89(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.14e-17bHLH family protein