PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun010518
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 187aa    MW: 21241.5 Da    PI: 10.4591
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-2570PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.24.4e-141761347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT+eE++l++ + k++G+g+W+ I+r +   Rt+ q+ s+ qky
        Vun010518 17 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVISRTPTQVASHAQKY 61
                     8*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129420.1171066IPR017930Myb domain
SuperFamilySSF466895.67E-171165IPR009057Homeodomain-like
TIGRFAMsTIGR015575.0E-181365IPR006447Myb domain, plants
SMARTSM007179.2E-131464IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.7E-121461IPR009057Homeodomain-like
PfamPF002492.2E-121761IPR001005SANT/Myb domain
CDDcd001678.03E-121762No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
GSSSVRPHEQ ERKKGVPWTE EEHKLFLLGL KKYGKGDWRN ISRNFVISRT PTQVASHAQK  60
YFIRQLSGGK DKRRASIHDI TTVNLTETTT TSSEDTNRST SPHVLSQQQQ QQNSTPTTPT  120
THFQWSNQSS TGMAMTFNPA HERVFMSPYG ANSFGVKMEA RNLHNESSYL GPQTQNMVFQ  180
MQQSSQH
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027940816.11e-135transcription factor DIVARICATA-like isoform X1
RefseqXP_027940817.11e-136transcription factor DIVARICATA-like isoform X2
SwissprotQ8S9H75e-68DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A4D6MHG11e-134A0A4D6MHG1_VIGUN; Protein MYSM1
STRINGXP_007142227.11e-118(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.15e-35Homeodomain-like transcriptional regulator
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]