PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun010676
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 181aa    MW: 20890.1 Da    PI: 5.3218
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-32971PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.4e-192976253
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53
               +++GVr+++ +grW+ eIrdp    +r kr++lg+f+taeeAa  +++a+ +l
  Vun010676 29 KFRGVRQRP-WGRWATEIRDP----IRrKRVWLGTFDTAEEAAVVYDRAAINL 76
               89*******.**********7....246**********************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.9E-282986IPR001471AP2/ERF domain
PfamPF008475.3E-122976IPR001471AP2/ERF domain
SMARTSM003801.0E-322992IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-192985IPR016177DNA-binding domain
PROSITE profilePS5103222.2472986IPR001471AP2/ERF domain
PRINTSPR003679.1E-113041IPR001471AP2/ERF domain
CDDcd000183.60E-303085No hitNo description
PRINTSPR003679.1E-115268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
XATNDSCCCS TKYKEAMKQQ HHQQKQEHKF RGVRQRPWGR WATEIRDPIR RKRVWLGTFD  60
TAEEAAVVYD RAAINLKVPD AVTNFIKPPL KECESGVKGG VVAHVLHPLR FCCFSLGWNL  120
LPLEETFKEE VFDGLNDEVD SFLFSDHALY EQPLPTVFSN IDVSLDEDLE SCKWDVDSFF  180
X
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-182591265ATERF1
3gcc_A5e-182591265ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027912588.15e-92ethylene-responsive transcription factor CRF4-like
TrEMBLA0A1S3VB851e-84A0A1S3VB85_VIGRR; ethylene-responsive transcription factor CRF4
STRINGXP_007134294.13e-77(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.17e-29cytokinin response factor 1