PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun010753
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family C2H2
Protein Properties Length: 178aa    MW: 19923.9 Da    PI: 10.0116
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45807189PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.00054769123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               +kC+ C+++Fs+   L  H  +H
  Vun010753 47 FKCKTCNRRFSSFQALGGHRASH 69
               89**********99999998887 PP
2zf-C2H210.90.001597119123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ++Cp+Cg  F     L  H+r+H
  Vun010753  97 HPCPICGLQFAIGQALGGHMRKH 119
                78*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.0864769IPR015880Zinc finger, C2H2-like
PfamPF139121.9E-114771IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.5124774IPR007087Zinc finger, C2H2
SuperFamilySSF576671.14E-647119No hitNo description
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
SMARTSM003550.2397119IPR015880Zinc finger, C2H2-like
PfamPF139122.2E-897120IPR007087Zinc finger, C2H2
PROSITE patternPS00028099119IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
XTVKQPTMKR GREEGELDNM AKCLMLLTKV GESDAKTKHQ VGEMGDFKCK TCNRRFSSFQ  60
ALGGHRASHN KPKLMITDLS CHHQLPSPTT KQQSRMHPCP ICGLQFAIGQ ALGGHMRKHR  120
TAINHGLFNN RRDSGSLSIL KKSKDGGRLN LCLDLNLMPL EDDDLKLNLR TPVLDCFI
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat stress. {ECO:0000269|PubMed:18201973}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027927201.11e-123zinc finger protein ZAT8-like
SwissprotQ9LX856e-32ZAT8_ARATH; Zinc finger protein ZAT8
TrEMBLA0A4D6N6161e-122A0A4D6N616_VIGUN; Uncharacterized protein
STRINGXP_007150296.13e-95(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.16e-32C2H2 family protein