PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun010817

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bHLH

Protein Properties

Length: 176aa MW: 19696.3 Da PI: 8.2388

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Vun#S45952901	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.3	4.2e-11	94	141	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq Vun010817 94 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 141 8***********************9....677***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	1.00E-9	88	145	No hit	No description
SuperFamily	SSF47459	1.7E-18	88	160	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.5E-18	90	160	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.828	90	140	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.8E-8	94	141	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.0E-10	96	146	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence Send to blast
MDPPLITHST FSSAYTLADI WLGTSDHHFS KNDSSSNKRM KVEGSSIKND GFKEEAETSS 60 VSGNKSSEQS TIPCDAPKQD YIHVRARRGQ ATDSHSLAER ARREKISERM KILQDLVPGC 120 NKVIGKALVL DEIINYIQSL QRQVEFLSMK LEVVNSRMNM SPNIDGFPLK DLAKLN

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269\|PubMed:23715469}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027902078.1	1e-129	transcription factor BHLH089-like isoform X2
Swissprot	Q69WS3	5e-60	BH094_ORYSJ; Transcription factor BHLH094
TrEMBL	A0A4D6NMF5	1e-123	A0A4D6NMF5_VIGUN; Phytochrome-interacting factor 3
STRING	XP_007138141.1	1e-108	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59640.1	3e-57	BIG PETAL P