PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun010944
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Trihelix
Protein Properties Length: 170aa    MW: 20037.6 Da    PI: 4.3871
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-23780PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.54.9e-254632787
   trihelix 27 kkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
               k+plWe++s+ m + g++rs+k+Ckekwen+nk++kk+ke++k r  e+s+tcpyf++l+a
  Vun010944  4 KAPLWEDISAGMLRLGYNRSAKRCKEKWENINKYFKKVKESNKHR-RENSKTCPYFHELDA 63
               89*****************************************87.78889********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.017135IPR017877Myb-like domain
CDDcd122031.11E-16242No hitNo description
PfamPF138372.8E-17564No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
XGPKAPLWED ISAGMLRLGY NRSAKRCKEK WENINKYFKK VKESNKHRRE NSKTCPYFHE  60
LDAIYREKSK SQNPFGASFL NMKAHEMMEP LMVQPEQQWR PPSQYEQGAA KENSESEYER  120
KEREEEEEED DEEEVEEDEN EEGDLESVED EGGNRYEIAT NKLSSVDTVE
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027936531.11e-117trihelix transcription factor GT-2-like
SwissprotQ391177e-35TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A4D6N2V31e-116A0A4D6N2V3_VIGUN; Uncharacterized protein
STRINGGLYMA10G36950.16e-84(Glycine max)
STRINGXP_007143537.12e-82(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-39Trihelix family protein