PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun011223
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 158aa    MW: 16572.9 Da    PI: 11.1112
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45876859PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.41.8e-09133157125
                XXXXCHHHCHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKk 25 
                e+elkrerrkq+NRe+ArrsR+RK+
  Vun011223 133 ERELKRERRKQSNRESARRSRLRKQ 157
                89**********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165969.0E-152114No hitNo description
Gene3DG3DSA:1.20.5.1708.5E-7127157No hitNo description
PfamPF001704.9E-7133157IPR004827Basic-leucine zipper domain
CDDcd147023.58E-9138157No hitNo description
PROSITE patternPS000360140155IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
XGNGHAESAE RGGENRLSPS VDTEGSSDGS DGNTSGANPT RRKRSRGGTP TTADGEGKTE  60
IQSSPISKDI AASNKIVAVA PASVAGTIVG PVVSSGMTTV LELRNPSSVH SKANATSAPQ  120
PSVLPAEAWL QNERELKRER RKQSNRESAR RSRLRKQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149155RRSRLRK
2149156RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTrans-activator of a beta-glucuronidase (GUS) reporter gene. Binds to a G-box-related element, (5'-GCAACGTGGC-3'). Also binds to the HEX-motif of wheat histone H3 promoter.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027932133.11e-103common plant regulatory factor 1-like isoform X1
RefseqXP_027932134.11e-103common plant regulatory factor 1-like isoform X1
RefseqXP_027932135.11e-103common plant regulatory factor 1-like isoform X2
SwissprotQ991422e-39TAF1_TOBAC; Transcriptional activator TAF-1 (Fragment)
TrEMBLA0A1S3TCR11e-100A0A1S3TCR1_VIGRR; transcriptional activator TAF-1-like isoform X2
TrEMBLA0A3Q0ENS81e-100A0A3Q0ENS8_VIGRR; transcriptional activator TAF-1-like isoform X1
TrEMBLA0A3Q0EPE41e-100A0A3Q0EPE4_VIGRR; common plant regulatory factor 1-like isoform X7
TrEMBLA0A3Q0ER451e-100A0A3Q0ER45_VIGRR; common plant regulatory factor 1-like isoform X8
STRINGXP_007147266.13e-85(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-16G-box binding factor 3
Publications ? help Back to Top
  1. Oeda K,Salinas J,Chua NH
    A tobacco bZip transcription activator (TAF-1) binds to a G-box-like motif conserved in plant genes.
    EMBO J., 1991. 10(7): p. 1793-802
    [PMID:2050116]