PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun011261
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family G2-like
Protein Properties Length: 156aa    MW: 17017.8 Da    PI: 6.5183
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-30778PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like45.41.8e-142292855
    G2-like 28 tPktilelmkvkgLtlehvkSHLQkYRl 55
                Pk++lelm+vk+Ltl+hvkSHLQ+YR+
  Vun011261  2 APKSVLELMDVKDLTLAHVKSHLQMYRT 29
               5**************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015578.2E-10329IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.606.3E-13329IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
RAPKSVLELM DVKDLTLAHV KSHLQMYRTV KTTDRAAASS GQSDVYDNGS SGDTSDDLMF  60
DMKSSRTSDV SIKQGRSSVN QDKDYHGLWG NSSREAWLHG KTKTDSVGNV PSLEKEMDPK  120
CVSYERISDG SSSSNVSGSS PKKPNLDLEF SLGQPL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027914529.11e-107probable transcription factor KAN2
SwissprotQ9C6164e-43KAN2_ARATH; Probable transcription factor KAN2
TrEMBLA0A4D6LQE61e-106A0A4D6LQE6_VIGUN; Two-component response regulator ARR-B family
STRINGGLYMA09G34030.28e-91(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.12e-44G2-like family protein
Publications ? help Back to Top
  1. Machida C,Nakagawa A,Kojima S,Takahashi H,Machida Y
    The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis.
    Wiley Interdiscip Rev Dev Biol, 2015 Nov-Dec. 4(6): p. 655-71
    [PMID:26108442]