PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun011277
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family AP2
Protein Properties Length: 156aa    MW: 16730.3 Da    PI: 4.6583
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45953020PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.84.5e-074283256
        AP2 32 slgkfgtaeeAakaaiaarkklege 56
               +lg+f t+eeAa+a++ a+ k++g+
  Vun011277  4 YLGTFATEEEAAEAYDIAAIKFRGA 28
               8*********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.5E-5141IPR001471AP2/ERF domain
PROSITE profilePS5103212.905135IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-9336IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-12335IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
XDLYLGTFAT EEEAAEAYDI AAIKFRGASA VTNFEMNRYD VENILNSSLP VGGVAKRLKL  60
SSPESEKKNL VGSTNEQPQG TNESSTINFS AIQPVASIPY DSANAYPQNL LHHFHHSSGG  120
SSSVQESAAI VTNATSLTIL PPPPVPGFFL WPPQSF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027917545.11e-107AP2-like ethylene-responsive transcription factor AIL6
RefseqXP_027917546.11e-107AP2-like ethylene-responsive transcription factor AIL6
TrEMBLA0A1S3TG471e-79A0A1S3TG47_VIGRR; AP2-like ethylene-responsive transcription factor AIL6
STRINGXP_007156467.11e-65(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10510.22e-20AINTEGUMENTA-like 6