PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun011424
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family C2H2
Protein Properties Length: 148aa    MW: 16614.2 Da    PI: 10.3266
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S50219091PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.000512850123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               ++C+ C++ Fs+   L  H  +H
  Vun011424 28 FQCKTCNRKFSSFQALGGHRASH 50
               89**********99999998887 PP
2zf-C2H215.35.8e-056890123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               ++C++Cg+ Fs    L  H+r+H
  Vun011424 68 HECSICGRGFSLGQALGGHMRKH 90
               78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.59E-92890No hitNo description
PfamPF139121.1E-102852IPR007087Zinc finger, C2H2
SMARTSM003550.0992850IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.2632855IPR007087Zinc finger, C2H2
PROSITE patternPS0002803050IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.4E-46691IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.9E-106792IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.186890IPR007087Zinc finger, C2H2
SMARTSM003550.0726890IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002807090IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MVVILKRQRE KESQEIKDLV KSFTPQEFQC KTCNRKFSSF QALGGHRASH KKPKLEGDLS  60
QDRKPKTHEC SICGRGFSLG QALGGHMRKH RDAVNEGFSS VVAEAPLLKR SNSSKRVMCL  120
ELDLNLTPLE NDLKLLFGNK APTVHLSL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027935291.11e-104zinc finger protein ZAT11-like
SwissprotQ9SLD44e-40ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A4D6N2F91e-103A0A4D6N2F9_VIGUN; Uncharacterized protein
STRINGXP_007144473.18e-84(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.12e-42C2H2 family protein