PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun011475
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 145aa    MW: 15778 Da    PI: 5.6296
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45929330PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.31.2e-2699144248
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEE CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvv 48 
                dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk  ers+ d++++
  Vun011475  99 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQIT 144
                8***************************************9.99886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.7E-2292142IPR003657WRKY domain
PROSITE profilePS5081120.11693138IPR003657WRKY domain
SuperFamilySSF1182903.79E-2195141IPR003657WRKY domain
SMARTSM007741.2E-2298145IPR003657WRKY domain
PfamPF031067.8E-2099142IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MVPADPDNHA SEKSTQIDGE GKAQPFDSSS PLVKSEIAVP SNELSLSSPV QIVSSGANAR  60
VEGDLDELNP RSNIATGLQP SQVDNRGSGL SVTAERVSDD GYNWRKYGQK HVKGSEFPRS  120
YYKCTHPNCE VKKLFERSHD GQITX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-1588138657Probable WRKY transcription factor 4
2lex_A3e-1588138657Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027932474.13e-98probable WRKY transcription factor 20 isoform X1
RefseqXP_027932475.15e-99probable WRKY transcription factor 20 isoform X2
RefseqXP_027932476.14e-99probable WRKY transcription factor 20 isoform X3
RefseqXP_027932477.14e-99probable WRKY transcription factor 20 isoform X3
RefseqXP_027932478.14e-99probable WRKY transcription factor 20 isoform X3
RefseqXP_027932479.14e-99probable WRKY transcription factor 20 isoform X3
SwissprotQ93WV04e-31WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A4D6KL706e-97A0A4D6KL70_VIGUN; WRKY transcription factor 33
STRINGXP_007146592.13e-89(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.11e-33WRKY family protein