PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun011756
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 127aa    MW: 14864.2 Da    PI: 10.4268
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45869010PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.58e-3441273121
        NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                +G+ F+Ptdeelv++yLk+++ g++ ++ +v++++d+++vePw+ p +  k  +    +++ew fFs+ +  ++++kr  r tksg+Wk tgkd++v s+
  Vun011756   4 VGMGFRPTDEELVDFYLKHRLLGDDPRV-RVMTDIDLCDVEPWEVPvMlaK--SvipfKDREWCFFSPVKLMSSNSKRFIRRTKSGFWKPTGKDRDVRSR 100
                79***********************999.99***************43441..25566999**************************************9 PP

        NAM  96 .kgelvglkktLvfykgrapkgektdW 121
                 +++++g+kktLvf  gra+k++++dW
  Vun011756 101 dTNTVIGTKKTLVFKYGRASKSVNSDW 127
                666779********************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100535.5852127IPR003441NAC domain
PfamPF023652.9E-164127IPR003441NAC domain
SuperFamilySSF1019411.96E-354127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MRIVGMGFRP TDEELVDFYL KHRLLGDDPR VRVMTDIDLC DVEPWEVPVM LAKSVIPFKD  60
REWCFFSPVK LMSSNSKRFI RRTKSGFWKP TGKDRDVRSR DTNTVIGTKK TLVFKYGRAS  120
KSVNSDW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-20512718133Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027907828.19e-88NAC domain-containing protein 62-like isoform X1
RefseqXP_027907829.19e-88NAC domain-containing protein 62-like isoform X1
RefseqXP_027907832.15e-88NAC domain-containing protein 62-like isoform X4
TrEMBLA0A1S3VT642e-65A0A1S3VT64_VIGRR; NAC domain-containing protein 40
STRINGXP_007135335.14e-60(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.12e-33NAC domain containing protein 86