PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun011871
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 118aa    MW: 13930 Da    PI: 9.4488
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-167a-Vigna_unguiculata-13882PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.74.2e-11544135
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgR 35
                     +++WT++E++ l+ +v+++G+g Wk I +  +     + R
        Vun011871  5 KQKWTQDEEDALIAGVEKHGPGKWKNILKDPQfapflTSR 44
                     79*************************9987766555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.328159IPR017930Myb domain
SuperFamilySSF466897.55E-13259IPR009057Homeodomain-like
SMARTSM007170.0023457IPR001005SANT/Myb domain
PfamPF002491.1E-8534IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.6E-12550IPR009057Homeodomain-like
CDDcd116601.14E-13650No hitNo description
Gene3DG3DSA:2.60.120.105.0E-787117IPR014710RmlC-like jelly roll fold
PfamPF058991.3E-789116IPR008579Domain of unknown function DUF861, cupin-3
SuperFamilySSF466897.55E-1392105IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MGNQKQKWTQ DEEDALIAGV EKHGPGKWKN ILKDPQFAPF LTSRSNIDLK VQKYTKRLDG  60
FFNSIFQQSL RGHDLSLIWC DTHLMHNRWG CPLGKFPWSY EEKETYYLVE GKVKVWVK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A4D6NBT58e-57A0A4D6NBT5_VIGUN; Myb proto-oncogene protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.13e-22MYB_related family protein