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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Vun011997 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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| Family | B3 | ||||||||
| Protein Properties | Length: 104aa MW: 12495.4 Da PI: 10.0878 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 39.2 | 1.2e-12 | 47 | 102 | 41 | 97 |
TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 41 esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
++ + W +++++++s+ +++t GWk+F+k n+L +gD + F d++++ v++v+
Vun011997 47 STPKFWPCRIRWTRRSSFeCYMTCGWKRFCKNNQLAAGDELKFVIDNQQK--NVIHVL 102
33489*******5555555*************************765444..466665 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS50863 | 10.503 | 9 | 104 | IPR003340 | B3 DNA binding domain |
| Gene3D | G3DSA:2.40.330.10 | 1.4E-9 | 25 | 102 | IPR015300 | DNA-binding pseudobarrel domain |
| SuperFamily | SSF101936 | 2.94E-10 | 25 | 102 | IPR015300 | DNA-binding pseudobarrel domain |
| Pfam | PF02362 | 7.6E-10 | 47 | 101 | IPR003340 | B3 DNA binding domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 104 aa Download sequence Send to blast |
MSLTKRFSFN NFFQSSVMFM DPSEYLHSDF ARQFLENGCR RSFITISTPK FWPCRIRWTR 60 RSSFECYMTC GWKRFCKNNQ LAAGDELKFV IDNQQKNVIH VLKV |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_027920920.1 | 1e-25 | uncharacterized protein LOC114178963 | ||||
| Refseq | XP_027922569.1 | 8e-26 | uncharacterized protein LOC114180428 | ||||
| TrEMBL | A0A4D6LUT7 | 7e-46 | A0A4D6LUT7_VIGUN; Uncharacterized protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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