PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00002704-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 475aa    MW: 51825.9 Da    PI: 9.7799
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00002704-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.46.1e-33195251360
                         -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                         DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  WALNUT_00002704-RA 195 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHSK 251
                         9***************************************.***************85 PP
2WRKY105.42.9e-33393450259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver++edp+++++tYeg+Hnhe
  WALNUT_00002704-RA 393 TDGFRWRKYGQKVVKGNPYPRSYYRCTSLKCSVRKHVERTSEDPRAFITTYEGKHNHE 450
                         7********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-30186252IPR003657WRKY domain
SuperFamilySSF1182904.45E-26191252IPR003657WRKY domain
SMARTSM007743.8E-37193251IPR003657WRKY domain
PROSITE profilePS5081123.686195252IPR003657WRKY domain
PfamPF031061.5E-25195249IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.1E-34377452IPR003657WRKY domain
SuperFamilySSF1182901.83E-28387452IPR003657WRKY domain
PROSITE profilePS5081134.544387452IPR003657WRKY domain
SMARTSM007742.8E-38392451IPR003657WRKY domain
PfamPF031066.7E-26394450IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MDTKEAERVV IAKPVASRPT CSSFRSFSEL LAGAIGVSPS NVCSTAVAAI RPKTVRFKPM  60
VNRAPPGPVS SQAKISGAAV CNSADEVPKF ESKATVVYKP LAKFVSKTTA SLLANMGNFN  120
TNHQPPQPTV ETSSQHSNQE KHKFRSQKSS NLHQKIPSQV ETMQAVGPSK VASQKLEEDP  180
KALPTTANGD SPSYDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSLDGQIAE  240
IVYKGEHNHS KPQPLKRNSS GTTQTLGIVS DGLGQDTTSS RYNEGNDGSE GRVENQNEVG  300
LAARSTYQGN AALTCDPVST GTIAAAAAGT PDNSCGLSGE CEEGNKTMEL ADEKPKSKKR  360
KSESQSNEAG LLGKGTQEPR IVLQNSTDSE TMTDGFRWRK YGQKVVKGNP YPRSYYRCTS  420
LKCSVRKHVE RTSEDPRAFI TTYEGKHNHE MPLKNTNPVV SETDFLAPRS KERRT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-30195452877Probable WRKY transcription factor 4
2lex_A1e-30195452877Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2448865e-55AC244886.2 Solanum lycopersicum strain Heinz 1706 chromosome 10 clone sle-19g7 map 10, complete sequence.
GenBankHG9754495e-55HG975449.1 Solanum pennellii chromosome ch10, complete genome.
GenBankHG9755225e-55HG975522.1 Solanum lycopersicum chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018850209.10.0PREDICTED: WRKY transcription factor 44-like
RefseqXP_018850210.10.0PREDICTED: WRKY transcription factor 44-like
RefseqXP_018850211.10.0PREDICTED: WRKY transcription factor 44-like
RefseqXP_018850212.10.0PREDICTED: WRKY transcription factor 44-like
TrEMBLA0A2I4H2260.0A0A2I4H226_JUGRE; WRKY transcription factor 44-like
STRINGEMJ063360.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67903450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.11e-109WRKY family protein