PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00003890-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 570aa    MW: 62026.4 Da    PI: 7.4703
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00003890-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.39.1e-10418470557
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                         kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  + 
  WALNUT_00003890-RA 418 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSV 470
                         9******************************************9999987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.4E-17414478IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.714416479IPR004827Basic-leucine zipper domain
PfamPF001709.9E-9418472IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.31E-11418469No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-10418474No hitNo description
CDDcd147033.15E-24419468No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    Send to blast
MGDTEETNSD TMQRLHSSFG TSSSSILKQH LSMDQLNIRQ LSPSVNRARH FQPNFSGDST  60
KRIGIPPSHP HQIPPISPYS QIPVSRPVNQ QTGSQNFSPG PAHSRSLSQP SFFSLDSLPP  120
LSPSVFRDSS STSISDAVPG DVSMEDRNAG SRSLLPPSPY SRGDASRVGD SLPPRKTHRR  180
SNSDIPYGFS SIMQSSPPLV PLRVAGGLER SLSGREPAQP VKKESSWGKG GEINTEGMDE  240
RKSEGEVVDD LFSAYMNLDN LDALNSSGTD YKNGNENRED LDSRASGTKT NGGDSSDNEA  300
ESSVNESGGN MQRAGLNSSA GRKEGIKRSA GGDIAPTTRH YRSLSMDSFV GKLHFGDESP  360
KLPPSPGTRP GQLSPSNSVD GNSAAFSLEF GNGEFSGAEL KKIMANEKLA DIALMDPKRA  420
KRILANRQSA ARSKERKMRY ISELEHKVQT LQTEATTLSA QLTLLQRDSV GLSNQNNELK  480
FRLQAMEQQA QLRDALNDAL TTEVQRLKLA TTELSGENPS KCMVPQLSVN AQMFQLQQPS  540
STQHNIHQLQ QQQQPRNENS NTTSKPESLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018841405.10.0PREDICTED: uncharacterized protein LOC109006545
RefseqXP_018841406.10.0PREDICTED: uncharacterized protein LOC109006545
TrEMBLA0A2I4GBX90.0A0A2I4GBX9_JUGRE; uncharacterized protein LOC109006545
STRINGVIT_03s0038g00860.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-150bZIP family protein