PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00004387-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ARR-B
Protein Properties Length: 765aa    MW: 83881.7 Da    PI: 5.1477
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00004387-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like78.21e-24213266155
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         k++++Wt+ LH+rF++a++++ G ekA+Pk+il++m+v+g+t+e+v+SHLQkYR+
  WALNUT_00004387-RA 213 KTKVVWTTSLHNRFLQAIRHI-GLEKAVPKNILQFMNVPGITRENVASHLQKYRI 266
                         6799*****************.********************************6 PP
2Response_reg79.11.5e-26271331109
                         EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
        Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                         +l+vdD+ + + ++  +l+  +y  v +++++ +al++l+ +++Dl+++D+ mp m+G+el ke +ee  +lp+i+++a +ee+ +l+ l+
  WALNUT_00004387-RA  27 ILVVDDDATSLAIVSAMLRALKY-AVVTVRNPLDALATLRMQKFDLVVTDLHMPVMNGFELQKEVEEEF-QLPVIMMSADDEESVILKSLE 115
                         89*********************.*****************************************9999.********************* PP

                         TTESEEEESS--HHHHHH CS
        Response_reg  92 aGakdflsKpfdpeelvk 109
                          Ga  + +Kp+ p++l +
  WALNUT_00004387-RA 116 NGAAFYMVKPITPNDLKN 133
                         ***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.1E-3325143IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23008.7E-3725166No hitNo description
SMARTSM004486.9E-3025135IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011039.93526139IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.5E-2327133IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.18E-2928138No hitNo description
Gene3DG3DSA:1.10.10.601.2E-24211270IPR009057Homeodomain-like
SuperFamilySSF466898.06E-18212270IPR009057Homeodomain-like
TIGRFAMsTIGR015575.1E-24213266IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 765 aa     Download sequence    Send to blast
MECEKLGAVQ PLSNTQLTPP PIVDIHILVV DDDATSLAIV SAMLRALKYA VVTVRNPLDA  60
LATLRMQKFD LVVTDLHMPV MNGFELQKEV EEEFQLPVIM MSADDEESVI LKSLENGAAF  120
YMVKPITPND LKNVWQYAVA GKKGRSAAIE QIRGIRGDSS GEKGSDHHHE YVHSASSCVN  180
EEKRTTGDTK LDPKRKAPAK KAGKEDLGEE TKKTKVVWTT SLHNRFLQAI RHIGLEKAVP  240
KNILQFMNVP GITRENVASH LQKYRIFLKR VADKGAVASR GFSMSADRYM RSSFASGQLP  300
FSVMQNLHQQ QYPKFPEQQQ MRASMFQQGG LGGNMRALNA PSTVDPFLFS NRATSNGSSV  360
PHYGFGHSFK APNVGPVRFP DKQAPSSNFN LPQLGHGHWP ALISHQANLR EQSFGNGNPL  420
YQANRSVLDI DQTKYNLGSM SLSNGDMAHG LMNAANSLMN GANSIPTYPQ QNEQRQGLLT  480
SSPINCNFGI SELLMGTANS SNPPPNSSFT NGTSYAGIKL SNEGQLVFTG PSGDHGYGLL  540
AGKNNNIAVA PMGNIGTSGY MTQGGGSSSA PGLENPNQLP PVLFDESTAN QHENALLMAP  600
QAQQQYGLSN RGEFTNHYGS DILLNNISTL SGISDPGQQL GEDDLSDLFL QQNINQLPYQ  660
CESQVNYDIS GSSSCVENMN EDIEENPLLS EVPSLGQNRA NEQLPNAVFE SNVYHDPEKN  720
VQLDQHSNQQ ENDRELEKDD DLINCINDQE WPEEEFMDFL FGLGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-20212272464ARR10-B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018830756.10.0PREDICTED: two-component response regulator ORR21-like isoform X1
TrEMBLA0A2I4FGH90.0A0A2I4FGH9_JUGRE; two-component response regulator ORR21-like isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101422534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-46response regulator 2