PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00007052-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 398aa    MW: 44931.1 Da    PI: 9.1004
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00007052-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.16.1e-11112153344
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                         ++k+ rr+++NReAAr+sR+RKka++++Le+   +L +  ++
  WALNUT_00007052-RA 112 ADKVKRRLAQNREAARKSRLRKKAYVQQLETSRLKLAQLEQE 153
                         79****************************854444444333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-4110168IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.7E-8110159No hitNo description
PfamPF001708.0E-8112155IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.117112156IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-6114155No hitNo description
PROSITE patternPS000360117132IPR004827Basic-leucine zipper domain
PfamPF141443.0E-30200275IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MVEMGEMPFH RLMMSSKAVM DSCATLWWAH VKRRCAKVMS SASIQPFTSR RMGIYNPFQQ  60
VSLWGDTFKG DSSPNTGAST VLQVDAGMHN KSEIISQESM GPSRNDEGSN SADKVKRRLA  120
QNREAARKSR LRKKAYVQQL ETSRLKLAQL EQELEKARKQ GMYGQSALDT SHGGFSGNVN  180
SGIAAFEMEY AHWVEEQNRQ ICELRSALQA HITEIELRML VESGLNHYHS LFRMKADAAK  240
ADVFYLMSGV WRTSTERFFL WIGGFRPSEL LNIIRPQLEP MTDQQVLNVC NLRQSSQQAE  300
DALSQGMEKL QQSLAQSIGI ESVIAGNYGS QMAAEMEKLE ALEGFVNQAD HLRHQTLQQM  360
SRILTTHQTA RGLLALGEYF HRLRALSSLW AARPREPA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018849635.10.0PREDICTED: transcription factor TGA7-like
SwissprotQ93ZE21e-169TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A2I4H0F20.0A0A2I4H0F2_JUGRE; transcription factor TGA7-like
STRINGVIT_18s0001g04470.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-152bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]