PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00009744-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 262aa    MW: 29664 Da    PI: 6.0731
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00009744-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.11.1e-101071531659
                         TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY  16 kgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         +g    r+YYrCt++   gC+++k+v+r +e p    +tY g+H+++
  WALNUT_00009744-RA 107 RGCYKRRNYYRCTHKfdqGCQATKHVQRIQEKPPKYRTTYIGNHTCR 153
                         566678********9999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081111.715104150IPR003657WRKY domain
SMARTSM007742.7E-10104154IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.0E-12105153IPR003657WRKY domain
SuperFamilySSF1182904.97E-11107153IPR003657WRKY domain
PfamPF031061.8E-11107153IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MECCCLPESL PSKPERAIEE LTQGHQFATQ LRSLLNTSLR LDVSTSAAND LLLKILNSFH  60
NTLLILNSDD GVSLHLHENN PAPAPLSTES SEGSCRSSTP STLKDRRGCY KRRNYYRCTH  120
KFDQGCQATK HVQRIQEKPP KYRTTYIGNH TCRTFHKAPE LILDSSPFLL SFDSTIPNKQ  180
DSPFFSSFQP IKQEEHREDK PSSDDITHNH SFSSDFLLSP DRSAFDSLGH LTALSESDNG  240
DVMSRFMVEP VDFDVDSLFF DF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018819285.10.0PREDICTED: probable WRKY transcription factor 70 isoform X2
TrEMBLA0A2I4EIQ90.0A0A2I4EIQ9_JUGRE; probable WRKY transcription factor 70 isoform X2
STRINGEOY044382e-58(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-20WRKY DNA-binding protein 70