PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00009957-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 298aa    MW: 32291.7 Da    PI: 8.6313
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00009957-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58e-193181256
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                        ++ GVr++  +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  WALNUT_00009957-RA 31 RFVGVRQRL-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 81
                        589***999.7*********43...36**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.9153188IPR001471AP2/ERF domain
SMARTSM003802.2E-343194IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-273188IPR001471AP2/ERF domain
PfamPF008473.7E-143181IPR001471AP2/ERF domain
CDDcd000182.93E-303189No hitNo description
SuperFamilySSF541712.81E-193289IPR016177DNA-binding domain
PRINTSPR003672.2E-63243IPR001471AP2/ERF domain
PRINTSPR003672.2E-65470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MAGPETTKAS VNTATTSDAN VQSSKPVAVR RFVGVRQRLS GRWVAEIKDS SQRVRLWLGT  60
YDTPEEAARA YDEAARALRG ENARTNFAVP VNQINSSMSG SASLCNVGGA LQPSHSDGRH  120
GLSFSSLKAR LSKNLQSIMA RTSTTENNKS SSKSRVSDQS TFAKIFHFRN YNQYQGGRQM  180
DMNNNSMEKV VQPSIVVPPH VETQPCSWES SSVSECSTAE WVGLGRQHGL DSDGSDIGEV  240
SFGHEHGLIM DHQIGGWMDS PEMGVFGSSC TGEGSRSKRF KVSSSVMVPP TFSGSPYN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1231921476Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018830294.10.0PREDICTED: ethylene-responsive transcription factor ABR1-like
TrEMBLA0A2I4FF700.0A0A2I4FF70_JUGRE; ethylene-responsive transcription factor ABR1-like
STRINGEOX960901e-103(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83243143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-15related to AP2 11