PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00010092-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 291aa    MW: 32140.3 Da    PI: 4.9849
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00010092-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-19134184255
                 AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                         +y+GVr+++ +g+++AeIrd      k +r +lg+f+taeeAa a+++a+++++g
  WALNUT_00010092-RA 134 HYRGVRRRP-WGKYAAEIRDS---SrKGARLWLGTFDTAEEAALAYDKAALRIRG 184
                         7********.**********3...2234*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.4E-31133193IPR001471AP2/ERF domain
SMARTSM003804.9E-37134198IPR001471AP2/ERF domain
PROSITE profilePS5103224.316134192IPR001471AP2/ERF domain
PfamPF008473.1E-14134184IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-23134194IPR016177DNA-binding domain
CDDcd000181.46E-30134192No hitNo description
PRINTSPR003675.1E-11135146IPR001471AP2/ERF domain
PRINTSPR003675.1E-11158174IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MWVLESKLVV GNMAKIGEDP PASAGILENV WASFIGGDGA CGGTRLYTAE MSRSWEELPC  60
FGGKDGSMET NLQRLPSLGR WISMGAETWE ELLHGVIPAS DIELSCNENL QSNGAASSCL  120
QKTNARAEKV VARHYRGVRR RPWGKYAAEI RDSSRKGARL WLGTFDTAEE AALAYDKAAL  180
RIRGRKAFLN FPLETVAKAL GLDNSGNDVN CPSLTNQGEN PDCTFLGCNT EKVCNPRKRA  240
LREWEEDIDM MIEQPSLKKT TSMEKIPGNQ FGVLEFQDLG SDYLDSLLSY F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-27133195466ATERF1
3gcc_A4e-27133195466ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018833534.10.0PREDICTED: ethylene-responsive transcription factor ERF091-like
TrEMBLA0A2I4FPF00.0A0A2I4FPF0_JUGRE; ethylene-responsive transcription factor ERF091-like
STRINGEOY281131e-112(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF95473142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.19e-30ERF family protein