PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00011542-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ZF-HD
Protein Properties Length: 96aa    MW: 10449.6 Da    PI: 8.7029
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00011542-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1054.8e-332884360
         ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                        +vrY eC+kNhAa++Gg+avDGC+Efm+s ge+g+  al CaACgCHRnFHRreve+e
  WALNUT_00011542-RA 28 TVRYAECQKNHAANIGGYAVDGCREFMAS-GEDGSNGALSCAACGCHRNFHRREVETE 84
                        79**************************9.999*********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047703.8E-302981IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015666.8E-273081IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257747.0E-273193IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152325.6793180IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    Send to blast
MKKRQVVVKK DCSSGRSSST TSSSVVRTVR YAECQKNHAA NIGGYAVDGC REFMASGEDG  60
SNGALSCAAC GCHRNFHRRE VETEVVCEYS PPNSRR
Functional Description ? help Back to Top
Source Description
UniProtInhibits zinc finger homeodomain (ZHD) transcription factors by interacting with them to prevent both their nuclear localization and their DNA-binding properties. Involved in integrating signals from multiple hormones by regulating the expression of specific genes. Promotes the formation of ectopic shoot meristems on leaf margins. {ECO:0000269|PubMed:21455630}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018826541.15e-65PREDICTED: mini zinc finger protein 3-like
SwissprotQ2Q4931e-40MIF3_ARATH; Mini zinc finger protein 3
TrEMBLA0A2I4F4G11e-63A0A2I4F4G1_JUGRE; mini zinc finger protein 3-like
STRINGXP_002514762.15e-53(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF155034100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.13e-38mini zinc finger