PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00011760-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 622aa    MW: 67557.2 Da    PI: 6.9878
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00011760-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.86.1e-30348406259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+H h+
  WALNUT_00011760-RA 348 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAnGCPVRKQVQRCAEDQTILVTTYEGNHSHP 406
                         7***************************999***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.8E-33332408IPR003657WRKY domain
SuperFamilySSF1182903.92E-27340408IPR003657WRKY domain
PROSITE profilePS5081129.126342408IPR003657WRKY domain
SMARTSM007747.2E-36347407IPR003657WRKY domain
PfamPF031064.1E-26349406IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 622 aa     Download sequence    Send to blast
MAKGSGLSVD SDPIGFFCHQ PMVLNSFPED NPGREPKWKL GAMDAALTSS APPTIPFNLN  60
WSRRQDSPSS SDNKRTVIDE VDFFAEKQGR DNKASSTDTD RKDSRDCPVA LEFNVNTGLN  120
LLTTNTSSDQ SMVDDGLSPN VEDKRAKSEL AVLQTEFKRM KTENQRLKEM IDQVSTNYNT  180
LRMHFVTLMK AQTSKNPEES GILVDGKVDG KNNGSLIVPR QFMDLRLATN GDANNENSLS  240
TLMEGRSREW NRSGSPGKTA EVMASEFIMS KSGNLNEELA FHQDKKEDGS KIGRGDRSPD  300
QASQEWSPPN KVPRFNPPKD VLHDQTEAAT MRKARVSVRA RSEAPMITDG CQWRKYGQKM  360
AKGNPCPRAY YRCTMANGCP VRKQVQRCAE DQTILVTTYE GNHSHPLPPN AMAMASTTSS  420
AAQMLLSGPM SSADGIMNSN FLTRTLLPCS SNMATISASA PFPTITLDLT QSPNPLQFQI  480
PFPNLAQSIS NAQTTSLPQI FGQALHNQSR FSGLQMSGQD MDRPSQLGHL QPHALALMNQ  540
LGQQNSLSDT LSAATAAIAA DPNFTSALVA AITSIIGASS QTNNNSNNNA NLTSTTSSNA  600
NLTSPSNSNG NNNISNSSFQ GN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22334409175WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018848459.10.0PREDICTED: probable WRKY transcription factor 31
TrEMBLA0A2I4GX360.0A0A2I4GX36_JUGRE; probable WRKY transcription factor 31
STRINGEOX932430.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-119WRKY family protein