PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00012385-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family C2H2
Protein Properties Length: 163aa    MW: 18031.8 Da    PI: 10.8335
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00012385-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.000864769123
                        EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                        ++C+ C++ F++   L  H  +H
  WALNUT_00012385-RA 47 FVCKTCNRQFPSFQALGGHRASH 69
                        89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.25E-845115No hitNo description
PfamPF139121.8E-124671IPR007087Zinc finger, C2H2
PROSITE profilePS501579.5154774IPR007087Zinc finger, C2H2
SMARTSM003550.164769IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
PROSITE profilePS501578.93393115IPR007087Zinc finger, C2H2
PfamPF139126.0E-1093117IPR007087Zinc finger, C2H2
SMARTSM003550.5893115IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028095115IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MKRGREDGNE LETADMAANF LILLSRVGEI DATRNTRNST SSTARAFVCK TCNRQFPSFQ  60
ALGGHRASHK KPRLMAGDLF HRIPTSPVRP KSHECSVCGL EFAIGQALGG HMRRHRAAIS  120
HEGMVIKHAV QAKPVMKKSS SKRVLCLDLN LTPVENDLKL SSW
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018835986.11e-119PREDICTED: zinc finger protein ZAT11-like
SwissprotQ9SLD41e-39ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A2I4FWG11e-118A0A2I4FWG1_JUGRE; zinc finger protein ZAT11-like
STRINGXP_009762518.17e-57(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.16e-42C2H2 family protein