PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00012916-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 579aa    MW: 63036.7 Da    PI: 6.7573
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00012916-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.5e-10424480561
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                         kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +  l++
  WALNUT_00012916-RA 424 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTN 480
                         9*******************************************9999877666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-17420484IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.565422485IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.46E-11424475No hitNo description
Gene3DG3DSA:1.20.5.1704.6E-11424479No hitNo description
PfamPF001704.7E-9424475IPR004827Basic-leucine zipper domain
CDDcd147033.31E-24425474No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    Send to blast
MGDTEEANSD MMQRLQSSFG TSSSSILKQP LSMEQLNISQ LSPSLNRARH FQQNFSGDST  60
KRVGIPPSHP HQIPPISPYS QIPVSRPVNQ QMGSQNFSPG PTHSRSLSQP SFFSLDALPP  120
LSPSMFRDSS STSISDAVSG DVSMEDRNTG SHSWLPPSPY TRGDAARVGD SLPPRKAHRR  180
SNSDIPFGFS NVMQSSPPLV PLRGSGGLER SMSSRENLGV AKPAQLVKKE LTWERGGDNN  240
AEGMGERKSE GEVVDDLFSA YMNLDNIDAL NSSGTDEKTG NENREDLDSR ASGTKTNGGD  300
SSDNEAESSV NESGASMQRA GLGSSAEKKE GIKRSAGGDI APTTRHYRSV SMDSFMGKLH  360
FGDESPKPPP SPGTRPGQMS PSNSIDGNSN AFSMEFGNGE FSGAELKKIM ANEKLAEIAL  420
TDPKRAKRIL ANRQSAARSK ERKMRYISEL EHKVQTLQTE ATTLSAQLTL LQRDSVGLTN  480
QNGELKFRLQ AMEQQAQLRD ALNEALTAEV QRLKLATAEM SGENPSKCMV PQLSVNPQMY  540
QLQQQQQSPT QFNIHQLQQQ PPQSQQQNGS TTSKHESLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018815342.10.0PREDICTED: transcription factor RF2a-like
TrEMBLA0A2I4E7H00.0A0A2I4E7H0_JUGRE; transcription factor RF2a-like
STRINGVIT_03s0038g00860.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-165bZIP family protein