PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00013305-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 302aa    MW: 33492 Da    PI: 4.9258
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00013305-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.91.2e-09141181343
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                          +k+ +r  +NR AA +sR+RKk+++  Le k+  Le+e  
  WALNUT_00013305-RA 141 LSKKRKRQLRNRDAAVKSRERKKMYVRDLEMKSRYLEGECL 181
                         57999********************************9974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.9E-11137199No hitNo description
SMARTSM003380.0016139203IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.278141183IPR004827Basic-leucine zipper domain
PfamPF001702.7E-8142185IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.25E-10143199No hitNo description
CDDcd147041.20E-17144195No hitNo description
PROSITE patternPS000360146161IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MEDPEFLVED DIIGRINFDG LFDEFPDGTN LFSVELPVFT DSSSAEAFLK PSPDSGSSWI  60
DEIETLLMKE DDGRIVAVEP TKEFCDSFLA DIIVDNSPGE GSSGADKDSS DCSDGGNGNC  120
DKGKFSNDNH GDDQNDADDP LSKKRKRQLR NRDAAVKSRE RKKMYVRDLE MKSRYLEGEC  180
LRLGRLLQCC YAENQALRLS LHSGSAFGAS VTKQESAVLL LESLLLGSLL WFLGITCLFT  240
LPTMAQSILK RAPLEDVGKK NPGVALRGAR SKMFGYLVVQ SFVKSRRCKA SRMKMKPNYL  300
II
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143162KRKRQLRNRDAAVKSRERKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018843068.10.0PREDICTED: bZIP transcription factor 60-like
TrEMBLA0A2I4GGP00.0A0A2I4GGP0_JUGRE; bZIP transcription factor 60-like
STRINGXP_002510740.11e-85(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.16e-14basic region/leucine zipper motif 60