PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00013451-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 430aa    MW: 46717.7 Da    PI: 6.4603
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00013451-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.8e-10235292562
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                         kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l  l+     l++e
  WALNUT_00013451-RA 235 KRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQRDTNGLTAE 292
                         9********************************************9999887777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-15231295IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.818233296IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.1E-11235289No hitNo description
SuperFamilySSF579593.94E-11235289No hitNo description
PfamPF001709.3E-9235287IPR004827Basic-leucine zipper domain
CDDcd147031.45E-24236285No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MDKEKTPGHG GGLPPPSGRY SGFSPTGSSF NVKPEPSSAS PSYPPLAPGS SSDSAHFGHG  60
MSADSSRFSH DISRMPDTPR RSLGHRRAHS EILTLPDDIS FDSDLGVVGG ADGPSFSDET  120
EEDLLSMYLD MDKFNSSSAT SSFQVGEPSS AAAAPSPALA AMPTPASGAV TSSENFAIGS  180
NERPRVRHQH SQSMDGSTTI KPEMLVSGSE DMSAADSKKA MSAAKLAELA LIDPKRAKRI  240
WANRQSAARS KERKMRYISE LERKVQTLQT EATSLSAQLT LLQRDTNGLT AENGELKLRL  300
QTMEQQVHLQ DALNDALKEE IQHLKVLTGQ AIPNGGPMMN FASFGAGQQF YPNNHAMHTL  360
LTTQQFQQLQ IHSQKQQQQF QQHQLHQLQQ QQLQQQQQEQ QQQQTGDLKI RGSLSSPSQK  420
ENATDVDSAV
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018839959.10.0PREDICTED: probable transcription factor PosF21
SwissprotQ040881e-159POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A2I4G7U10.0A0A2I4G7U1_JUGRE; probable transcription factor PosF21
STRINGXP_008222595.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55173249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-144bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]