PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00014050-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 367aa    MW: 41816.2 Da    PI: 5.7101
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00014050-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.11.1e-292810550128
                 NAM  50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +v ++++ew+fFs r +ky++g++++rat+ gyWkatgk+++v+s +++++g+k+tLvf++grapkge+t+W+mhey +
  WALNUT_00014050-RA  28 SVIQSDNEWFFFSARGRKYPNGSQSRRATELGYWKATGKERNVKS-GSNVIGTKRTLVFHTGRAPKGERTEWIMHEYCM 105
                         3445789**************************************.99*****************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100536.1251121IPR003441NAC domain
SuperFamilySSF1019413.27E-3230120IPR003441NAC domain
PfamPF023659.9E-1433104IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MQFLLTQPLF LPGLSYLFVL VNLQTAKSVI QSDNEWFFFS ARGRKYPNGS QSRRATELGY  60
WKATGKERNV KSGSNVIGTK RTLVFHTGRA PKGERTEWIM HEYCMTGISQ DSFVVCRLRK  120
NLEFRPTDST NQASSTQTNL LTLPCVVSDV GIEQSGLSEG DKAVGSSHDS YSLDQIDSTS  180
ESDQKLTNEV TMAESSSQQK EIGIEEDFYA EILKDDIIKL DESLLSVSPL FLPTMTDHVS  240
EAERETQQPI QEMVSQVPPL QGTAYRRIKL RLKEAKKFPA EGPESWESGE TVDNYLAEKD  300
EHDPNQEQQP PKCLLGIFYT RTINHWRAYV LFIILTLLAL FLSWLGGSRQ ARRITYATLY  360
EHFWQRM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-233212172168NAC domain-containing protein 19
3swm_B2e-233212172168NAC domain-containing protein 19
3swm_C2e-233212172168NAC domain-containing protein 19
3swm_D2e-233212172168NAC domain-containing protein 19
3swp_A2e-233212172168NAC domain-containing protein 19
3swp_B2e-233212172168NAC domain-containing protein 19
3swp_C2e-233212172168NAC domain-containing protein 19
3swp_D2e-233212172168NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018831278.10.0PREDICTED: NAC domain-containing protein 60-like
TrEMBLA0A2I4FI080.0A0A2I4FI08_JUGRE; NAC domain-containing protein 60-like
STRINGEOY333541e-119(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73153346
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44290.13e-68NAC domain containing protein 60