PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00014592-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 408aa    MW: 43479.8 Da    PI: 6.6884
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00014592-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.88.9e-22310372163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e+++++ e+++l +e+
  WALNUT_00014592-RA 310 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAETLKEENASLRSEVNRIRSEYDQLLAEN 372
                         89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.3E-291100IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.4E-52140278No hitNo description
Gene3DG3DSA:1.20.5.1706.0E-18303368No hitNo description
SMARTSM003382.0E-22310374IPR004827Basic-leucine zipper domain
PfamPF001704.8E-20310372IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.346312375IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.81E-11313369No hitNo description
CDDcd147026.76E-25315366No hitNo description
PROSITE patternPS000360317332IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MGSSEMDKQA KEKEPKTPPP AASTTTQEPS SNTGTSAVNP DWSGFQAYSP IPPHGFLASS  60
PQAPPYMWGV QHIMPPYGTP PHPYVAMYPH GGIYAHPSMP PGSYPFSPFA MPSPNGMAET  120
SVNTPGNMEA DVRPPSEVKE KLPIKRSKGS LGSLNMITGK NNEHTKTSGA SANGVYSKSA  180
ESGSEGTSEG SDENSQSDSQ LKSGGGQDSF EAEASQNGNS VHGPQNGGPN TPHTIVNQAM  240
AMVPLSGAAA PPLAVAGPTT NLNIGMDYWG APTSSAVPAM RGKVPPTPVA GGVVTGSRDS  300
VQSQLWIQDE RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRAETLKEE NASLRSEVNR  360
IRSEYDQLLA ENASLKEKLG EAPGHEDPRS GRKDQHSSGD TQQTRQTE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1326332RRSRLRK
2326333RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018852229.10.0PREDICTED: bZIP transcription factor 16-like
SwissprotQ501B21e-169BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2I4H7V60.0A0A2I4H7V6_JUGRE; bZIP transcription factor 16-like
STRINGEOY252260.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40173256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-138basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]