PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

WALNUT_00014850-RA

Organism

Juglans regia

Taxonomic ID

51240

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans

Family

Dof

Protein Properties

Length: 351aa MW: 36553.5 Da PI: 9.433

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
WALNUT_00014850-RA	genome	JHU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	6.8e-39	74	133	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ WALNUT_00014850-RA 74 ETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 133 7789*****************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101447	7.06E-5	36	45	No hit	No description
ProDom	PD007478	2.0E-31	57	122	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.8E-32	76	131	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.544	77	131	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	79	115	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence Send to blast
MVFSSIPAYL DPANWQQQPN HPPGTSAAAA SSQLLPPPPP PPPPPQPHGG GSSGSIRPGS 60 MADRARMANI PMPETALKCP RCESTNTKFC YFNNYSLTQP RHFCKTCRRY WTRGGALRNV 120 PVGGGCRRNK RSKGSSSKSP ASSADRQSGS AGSTSSIPSN SGTAGDVIGL GPTMPPLRFM 180 TPNLHQLTHD FAASEIGLNY GLNYGAISAP MGVAGDLNFH IGSALGGGAG TDGGGSLLSS 240 GGLEQWRLQQ TQQFPFFGGL DPNSVPGLFG SGVDASSYVG GASQGRVKAS SSGVTQQAAS 300 VKMEENNQEL NLSRQFLGIP GNEQYWSGNT STTAWTDLSG FSSSSTTRNP L

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence Send to blast

MVFSSIPAYL DPANWQQQPN HPPGTSAAAA SSQLLPPPPP PPPPPQPHGG GSSGSIRPGS  60
MADRARMANI PMPETALKCP RCESTNTKFC YFNNYSLTQP RHFCKTCRRY WTRGGALRNV  120
PVGGGCRRNK RSKGSSSKSP ASSADRQSGS AGSTSSIPSN SGTAGDVIGL GPTMPPLRFM  180
TPNLHQLTHD FAASEIGLNY GLNYGAISAP MGVAGDLNFH IGSALGGGAG TDGGGSLLSS  240
GGLEQWRLQQ TQQFPFFGGL DPNSVPGLFG SGVDASSYVG GASQGRVKAS SSGVTQQAAS  300
VKMEENNQEL NLSRQFLGIP GNEQYWSGNT STTAWTDLSG FSSSSTTRNP L

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00295	DAP	Transfer from AT2G37590	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018831327.1	0.0	PREDICTED: dof zinc finger protein DOF5.1-like
TrEMBL	A0A2I4FI63	0.0	A0A2I4FI63_JUGRE; dof zinc finger protein DOF5.1-like
STRING	EOY07547	1e-129	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF656	34	143

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	4e-44	DNA binding with one finger 2.4