PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00015291-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 336aa    MW: 36853.4 Da    PI: 5.1184
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00015291-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.7e-30155213259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp ++++tY+ eHnh+
  WALNUT_00015291-RA 155 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRSDPGMFIVTYTAEHNHP 213
                         79*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-30149215IPR003657WRKY domain
PROSITE profilePS5081134.727149215IPR003657WRKY domain
SuperFamilySSF1182905.1E-26152215IPR003657WRKY domain
SMARTSM007741.5E-36154214IPR003657WRKY domain
PfamPF031062.2E-25156213IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010150Biological Processleaf senescence
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MEEDWDLQAV VRGCASTSAT SSSSSSSTTT TAASFLGSFH SDSWISSFGG EDVGRLFSFP  60
DPFEATHVSE ELHELYKPFF PKSQPLSPQT SPISPLISSL SAFSASSKAK TQQQQQQQQQ  120
QPKQSQACSG TNPRSKRRKN LLKKVCQVPA EGLSSDIWAW RKYGQKPIKG SPYPRGYYRC  180
SSSKGCLARK QVERNRSDPG MFIVTYTAEH NHPAPTHRNS LAGSTRQKPL TTQTVTAGES  240
KKPNSAKPYS PANSMEDELA LPQSTTTDSK EDSREEREDI VEEEEEDDEF GISDVALSDD  300
FFVGLEGIVG PEAGDYFSDN LPATFVLPNW VTNNAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-22142216580Disease resistance protein RRS1
5w3x_D1e-22142216580Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00422DAPTransfer from AT4G01250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018830099.10.0PREDICTED: WRKY transcription factor 22-like
TrEMBLA0A2I4FEM30.0A0A2I4FEM3_JUGRE; WRKY transcription factor 22-like
STRINGEOX958621e-130(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42053259
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-68WRKY family protein