PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00016160-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 540aa    MW: 59910.2 Da    PI: 7.3557
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00016160-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.53.6e-30283341259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d++v+++tYe +Hnh+
  WALNUT_00016160-RA 283 SDGCQWRKYGQKTAKGNPCPRAYYRCTMAiGCPVRKQVQRCAQDTSVLITTYEANHNHP 341
                         7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-31267343IPR003657WRKY domain
SuperFamilySSF1182906.15E-27276343IPR003657WRKY domain
PROSITE profilePS5081129.677277343IPR003657WRKY domain
SMARTSM007744.7E-35282342IPR003657WRKY domain
PfamPF031064.2E-26284341IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    Send to blast
MASSHSGEDH ELARPINITN SVLENFMDAK SAHQIKEFHD FFARSRCCEV TEKRPPLPHQ  60
DDKDAPPLIL KPKAECSIDI AGLKDLIPSP NKVTQESKFD QEQPLNQLTL LRANLELARN  120
ENGNLKEMLA RATKNYTALQ SHLLLLVQPR AANIKHYFLP KDDDSTHEKG GSLVHDDRRP  180
STPLLLDINE PFRSDNWKQE MDRHDDHDMI NKIERKHKIS TADDDDHGGV NDVHDHHHTS  240
KLRWEPRTKN VEPAEKIPAH DHEVSCKKAR VSIRARSNAP LMSDGCQWRK YGQKTAKGNP  300
CPRAYYRCTM AIGCPVRKQV QRCAQDTSVL ITTYEANHNH PLPPAATIMA KTTSAAANML  360
LSGSTTSDMI NSSKAGLFTS MPSYPSSTIA TTSYSAPYPK LTLDLTHVPD HDHSIMKFQH  420
RPPFSLSSPA SFFRDLPLHG YPVQQLARHP LCMSSEKHEE LSSGVNTVGA AIATDHDFTA  480
ALAAAVSSII QGTGAQDNKN SNHSTDHVDA ARDSSNSPKM PVIVPGSPQF PQSCTTFTTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20269345176WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018840233.10.0PREDICTED: probable WRKY transcription factor 47
TrEMBLA0A2I4G8L00.0A0A2I4G8L0_JUGRE; probable WRKY transcription factor 47
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104392541
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.12e-66WRKY family protein