PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00016209-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 310aa    MW: 35255.4 Da    PI: 6.5062
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00016209-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.48.1e-25125186159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         +dDg++WrKYGqK++ +++fpr+YYrCt++   gC+++k+v+r +e+p+   +tY g+H ++
  WALNUT_00016209-RA 125 MDDGHAWRKYGQKVILNAKFPRHYYRCTHKfdqGCQATKHVQRIQEEPQKHRTTYIGQHSCR 186
                         59***************************9999**************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-25110186IPR003657WRKY domain
SuperFamilySSF1182903.01E-24118186IPR003657WRKY domain
PROSITE profilePS5081121.39120184IPR003657WRKY domain
SMARTSM007745.9E-35125187IPR003657WRKY domain
PfamPF031065.2E-23126186IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MECCWPENLP SKPKRAIDQL IEGHQLATQL RSLLSNSLGD DESTLPPAKD LLLKILNSFQ  60
NSLMILNSDD PDHELMSPIP TKTHGTKSES SEGSCRSIST LKDRRGCYKR RKNTQTWTKD  120
TATLMDDGHA WRKYGQKVIL NAKFPRHYYR CTHKFDQGCQ ATKHVQRIQE EPQKHRTTYI  180
GQHSCRTFLK APELILHEDP SDPTTTDSSI LLSFDNTISN KQDSHFLISS FQSIKQERKE  240
EKPAIRSDDI ITHTHNQSSS SDYLLSPDRT PDLDPFGHMP VLSESDNGDV ISGVIVPPVD  300
FDDDVFSFNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A5e-22125186869OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018814414.10.0PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A2I4E4T80.0A0A2I4E4T8_JUGRE; probable WRKY transcription factor 70
STRINGEOY044384e-91(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-42WRKY DNA-binding protein 70