PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00016251-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 259aa    MW: 29684.2 Da    PI: 6.5132
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00016251-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-3053111259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  WALNUT_00016251-RA  53 SDLWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDASMLIITYTSSHNHP 111
                         699***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.0E-3245113IPR003657WRKY domain
SuperFamilySSF1182904.32E-2649113IPR003657WRKY domain
SMARTSM007744.0E-3652112IPR003657WRKY domain
PROSITE profilePS5081131.14653113IPR003657WRKY domain
PfamPF031062.2E-2554111IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MDRSLSPKLH KEIPEELKPE TQASKRRKMV QKHVVKVRIG ANVGKLKNEG PPSDLWSWRK  60
YGQKPIKGSP YPRGYYRCST SKGCSAKKQV ERCRTDASML IITYTSSHNH PGPDLSTTNL  120
IQPSKEPQNH SNEDLSTLPK QEQLELAHDE KRNEPNMTTR EKDPVEDHFH YIQSPISGSQ  180
DIIANQGEDP FIVQHERLHE TVLLLDEEPL CYSQFMNLST PISEENDFYD ELEELPTYSS  240
FTSSARNNFP NERIPVVPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B4e-22531131779Disease resistance protein RRS1
5w3x_D4e-22531131779Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018822131.10.0PREDICTED: probable WRKY transcription factor 69 isoform X1
TrEMBLA0A2I4ERV10.0A0A2I4ERV1_JUGRE; probable WRKY transcription factor 69 isoform X1
STRINGEMJ025641e-107(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.15e-37WRKY DNA-binding protein 35