PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00019202-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 212aa    MW: 22255.6 Da    PI: 5.0036
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00019202-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76.1e-184494155
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                        + y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+ +l+g
  WALNUT_00019202-RA 44 PVYRGVRRRS-TGKWVSEIREPR----KpNRIWLGTFPTPEMAAVAYDVAAIALKG 94
                        68*****887.9*********94....478**********************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.9E-114494IPR001471AP2/ERF domain
SMARTSM003803.8E-3345108IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-2045104IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-2945104IPR001471AP2/ERF domain
PROSITE profilePS5103222.28645102IPR001471AP2/ERF domain
CDDcd000182.19E-2946104No hitNo description
PRINTSPR003673.8E-84657IPR001471AP2/ERF domain
PRINTSPR003673.8E-86884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MHYYQLSSTY TNSSGNSNNG RSEASGSNAS VTAGSAPPTS GRHPVYRGVR RRSTGKWVSE  60
IREPRKPNRI WLGTFPTPEM AAVAYDVAAI ALKGQRTELN FPNSASSLPV PASTSPRDIQ  120
AAAASAAAAL GAAAAAMGAA RDASTGNEGG GARSTLEPEI PDSDGFVDED LIFDMPNVLV  180
NMAQGMLLSP PRLDIAGDDA ENAEYQNLWK FP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-15431041274Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018839488.11e-153PREDICTED: ethylene-responsive transcription factor ERF024
SwissprotQ9SJR05e-56ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A2I4G6G61e-151A0A2I4G6G6_JUGRE; ethylene-responsive transcription factor ERF024
STRINGcassava4.1_031718m2e-77(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.11e-46ERF family protein