PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

WALNUT_00019247-RA

Organism

Juglans regia

Taxonomic ID

51240

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans

Family

NAC

Protein Properties

Length: 208aa MW: 24223.1 Da PI: 9.7036

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
WALNUT_00019247-RA	genome	JHU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	33	1.7e-10	11	75	4	63
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.....kvkaeekewyfFsk 63 +rF+P ++l++++L++k++g++ + ++i+e++ +k+ePw+L+ k +++++ + +++Fs WALNUT_00019247-RA 11 WMRFNPPKDQLIDFFLRAKITGNDELV-DFIPEAQCCKWEPWELKgKilsphSYHQRPRFMFYFSL 75 58*******************9655.99************9435554322223334455654 PP
2	NAM	77.9	2.3e-24	83	175	40	128
NAM 40 ykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmh 124 y+ +P++L + +k+ +ew+fFs+ d k+++g+r+nrat++g+Wk tgkdk ++s + +g kk Lvfy+gr kgekt+W +h WALNUT_00019247-RA 83 YSGNPSNLCSacldscVIKTAYSEWWFFSPLDLKHRSGNRSNRATNAGFWKVTGKDKIIMS-DLGMIGKKKYLVFYRGRG-KGEKTNWKIH 171 55688888633666666666778************************************.8999******9887.679*** PP NAM 125 eyrl 128 ey+ WALNUT_00019247-RA 172 EYHT 175 96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	31.822	8	201	IPR003441	NAC domain
SuperFamily	SSF101941	1.96E-10	10	76	IPR003441	NAC domain
Pfam	PF02365	1.1E-17	11	174	IPR003441	NAC domain
SuperFamily	SSF101941	1.57E-25	83	183	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence Send to blast
MDALSLKVRP WMRFNPPKDQ LIDFFLRAKI TGNDELVDFI PEAQCCKWEP WELKGKILSP 60 HSYHQRPRFM FYFSLQKFVI LCYSGNPSNL CSACLDSCVI KTAYSEWWFF SPLDLKHRSG 120 NRSNRATNAG FWKVTGKDKI IMSDLGMIGK KKYLVFYRGR GKGEKTNWKI HEYHTTLKDL 180 DGTHPGQVGL NDWFVILLAS HFFLISIS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	3e-20	5	195	14	159	NO APICAL MERISTEM PROTEIN
1ut4_B	3e-20	5	195	14	159	NO APICAL MERISTEM PROTEIN
1ut7_A	3e-20	5	195	14	159	NO APICAL MERISTEM PROTEIN
1ut7_B	3e-20	5	195	14	159	NO APICAL MERISTEM PROTEIN
3swm_A	3e-20	5	195	17	162	NAC domain-containing protein 19
3swm_B	3e-20	5	195	17	162	NAC domain-containing protein 19
3swm_C	3e-20	5	195	17	162	NAC domain-containing protein 19
3swm_D	3e-20	5	195	17	162	NAC domain-containing protein 19
3swp_A	3e-20	5	195	17	162	NAC domain-containing protein 19
3swp_B	3e-20	5	195	17	162	NAC domain-containing protein 19
3swp_C	3e-20	5	195	17	162	NAC domain-containing protein 19
3swp_D	3e-20	5	195	17	162	NAC domain-containing protein 19
4dul_A	3e-20	5	195	14	159	NAC domain-containing protein 19
4dul_B	3e-20	5	195	14	159	NAC domain-containing protein 19

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018840875.1	1e-105	PREDICTED: NAC domain-containing protein 91-like isoform X1
TrEMBL	A0A2I4GAI0	1e-103	A0A2I4GAI0_JUGRE; NAC domain-containing protein 91-like isoform X1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF25165	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	1e-41	NAC transcription factor-like 9