PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00019502-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 413aa    MW: 45993.4 Da    PI: 4.3218
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00019502-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-194695255
                 AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  WALNUT_00019502-RA 46 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 95
                        789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.73E-3145102No hitNo description
SMARTSM003801.6E-3546109IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-1946103IPR016177DNA-binding domain
PfamPF008471.0E-134695IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-2746102IPR001471AP2/ERF domain
PROSITE profilePS5103219.55946103IPR001471AP2/ERF domain
PRINTSPR003676.1E-84758IPR001471AP2/ERF domain
PRINTSPR003676.1E-86985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MARKRNSSGE TVEDKNSREG TMVWDQMVKE AAATVALGGA VRARKRFVGV RQRPSGRWVA  60
EIKDTIQKIR VWLGTFDTAE EAARAYDEAA CLLRGANTRT NFWPCSSSSS SSPALSSKIT  120
NLLLQRLKTR NSSTCTASSA TSSLPIGQQE KKQAEAYRDE ATDFSDTSFT DYLNDPEDYT  180
NFNNINVPST SATAASPDYM NPSFESSFTE KQDCRERETD FDYNWNPNVA QTSSGDGSFG  240
GEGEEDGEEA GTDVGIIDFR FVDDSIGNCF YSPFEIAEEI EEPVLEPENY TDEPSMLRAA  300
MKRMKYERKF SASLYAFNGI SECLKLKNRS RNLNGRGISD QLSNLQKACN NNKVEKSAEE  360
EEEEEYVEMM GKREEETPQS SVEMGTSSAS SLSNEGEWSL WSSLDLPPIC FVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-12461021471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018813977.10.0PREDICTED: dehydration-responsive element-binding protein 2A-like
TrEMBLA0A2I4E3K90.0A0A2I4E3K9_JUGRE; dehydration-responsive element-binding protein 2A-like
STRINGcassava4.1_008867m1e-165(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-21related to AP2 11