PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00019989-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 397aa    MW: 43257.3 Da    PI: 8.8491
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00019989-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.47.1e-2974133159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         ++Dg++WrKYGqK  +g+++pr+YYrC+ a +Cpv+k+v+r+aed +++++tYeg+Hnh+
  WALNUT_00019989-RA  74 MNDGCHWRKYGQKISRGNPCPRAYYRCAVAlECPVRKQVQRCAEDMSILITTYEGTHNHP 133
                         58****************************9****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.7E-3059135IPR003657WRKY domain
SuperFamilySSF1182906.67E-2667135IPR003657WRKY domain
PROSITE profilePS5081127.64669135IPR003657WRKY domain
SMARTSM007744.3E-3374134IPR003657WRKY domain
PfamPF031064.8E-2575133IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MRYNHNIGWE STEQLASSDP SSKEPNKQIV EAGDTWLPSK TLKTMRNGDD EISQQTHVKR  60
ARVSVRARCD TPTMNDGCHW RKYGQKISRG NPCPRAYYRC AVALECPVRK QVQRCAEDMS  120
ILITTYEGTH NHPLPMSATA MASATSAAAS MLLSGSSISE PGLGSTTTTI AAPILNAFNL  180
NLLDNSGAKR FYVPNSSLTT PLFPTVTLDL TAPPSPPHTL FNRSSSSFVS NPRFLSRSLS  240
FSSSEPTIPT GWDSGYHGYT AVPYNKTHTG FLNPGKQSQH FYQSYLEKNH QASSQESITE  300
TLTKAIASDP TFRSAIASTI SSMVGGGATH DNQGGVERLC QKPKWGEPVQ AVYPDPSAQN  360
GKACQTSYFN RFSLPLSVSK STSASSPTIE DQMNRQV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-1961135174WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018835916.10.0PREDICTED: probable WRKY transcription factor 72
SwissprotQ9LXG81e-79WRK72_ARATH; Probable WRKY transcription factor 72
TrEMBLA0A2I4FW990.0A0A2I4FW99_JUGRE; probable WRKY transcription factor 72
STRINGEOY033941e-126(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-73WRKY DNA-binding protein 72