PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00020781-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 476aa    MW: 53399.3 Da    PI: 7.4994
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00020781-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.44.9e-11185225545
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                         k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  WALNUT_00020781-RA 185 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQEL 225
                         7789************************8766666655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-8178227No hitNo description
SMARTSM003386.6E-8181260IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289183227IPR004827Basic-leucine zipper domain
CDDcd147081.59E-20185231No hitNo description
SuperFamilySSF579591.81E-7185227No hitNo description
PfamPF001703.2E-8185225IPR004827Basic-leucine zipper domain
PROSITE patternPS000360188203IPR004827Basic-leucine zipper domain
PfamPF141441.2E-29277349IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MASNIKATSQ STQVQQQQLQ QQQYQQQHQH QIQDHHHHQI PYGMMQSSSS SSVPGNLISK  60
DTGAYDLGEL DQALFLYLDG QDPNTLHDQR RYFSAESQGM RPPTLNIFPS QPMHVEPSST  120
KISTGLVSSS TSGSKRPSEP SMELANARND ASSGPEPAKS IKREGSRKGP TSSSEQEGPK  180
TPDPKTLRRL AQNREAARKS RLRKKAYVQQ LESSRIKLTQ LEQELQRARS QGIFLGGGSL  240
LGGEQGLPVA VSNISSDAAV FDMEYARWLE EHHRITCELR AAVQEHLPEN ELRLFVENYL  300
VHYDEAMNLK SMVAKTDVFH LVSGMWKTPA ERCFMWMGGF KPSELIKIIL NQIEPLTEQQ  360
ILGICGLQQS TQEAEEALSQ GLDALNQSLV DTITADSLSC PPIMASYMGQ MAMAMNKLST  420
LEGFVRQADN LRHQTIHRLH QILTIRQAAR CFLAIAEYFH RLRALSSLWL ARPRQE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018808536.10.0PREDICTED: transcription factor TGA2.2
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2I4DN030.0A0A2I4DN03_JUGRE; transcription factor TGA2.2
STRINGEOY094420.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-175bZIP family protein